G'day handyman156,
Its only CD1 that has the SafeDisc protection. Simply use Clone CD (My Preference) to copy CD1...... If your using the "Protected Game PC Profile" in Clone CD...right click it & select edit to reduce read speed to say 8X. (works better for me)
With CD2..... Copy / Paste the contents to your hardrive & create a folder like Crack or Fix & place any patches / cracks....fixes into it.... then copy this back to a CD...remembering to use the same name as your original CD..... in this case... "GENERALS2".
Hope you get that...........